Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1937024 bp
Thymine Count
1939578 bp
Guanine Count
2099634 bp
Cytosine Count
2058728 bp
Genome Length
8076405 bp
Protein-coding Genes
7179 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Site-specific recombinase for integration and excision | SAMEA2275726_04118 | Not Available | Negative | 4123637 - 4125283 | 60525.0 |
| probable oxidoreductase | SAMEA2275726_00001 | Not Available | Positive | 3 - 443 | 16053.5 |
| metal-dependent hydrolase | SAMEA2275726_00002 | Not Available | Positive | 448 - 1332 | 32745.5 |
| putative vanillate o-demethylase reductase subunit | SAMEA2275726_00003 | Not Available | Positive | 1329 - 2456 | 40238.6 |
| short-chain dehydrogenase/reductase family oxidoreductase | SAMEA2275726_00004 | Not Available | Positive | 2472 - 4292 | 66103.9 |
| putative ubie/coq5 methyltransferase | SAMEA2275726_00005 | Not Available | Negative | 4310 - 5080 | 27853.4 |
| cyclohexanone monooxygenase | SAMEA2275726_00006 | Not Available | Positive | 5337 - 6917 | 58676.0 |
| polyketide cyclase / dehydrase and lipid transport | SAMEA2275726_00007 | Not Available | Positive | 6907 - 7452 | 20627.8 |
| mycothiol conjugate amidase mca | SAMEA2275726_00008 | Not Available | Positive | 7504 - 8376 | 32086.6 |
| uncharacterised protein | SAMEA2275726_00009 | Not Available | Negative | 8489 - 9325 | 30872.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
