Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1937024 bp
Thymine Count
1939578 bp
Guanine Count
2099634 bp
Cytosine Count
2058728 bp
Genome Length
8076405 bp
Protein-coding Genes
7179 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA2275726_04109 | Not Available | Positive | 4118930 - 4119355 | 15683.3 |
| uncharacterised protein | SAMEA2275726_04110 | Not Available | Positive | 4119356 - 4119826 | 16835.2 |
| Major capsid protein | SAMEA2275726_04111 | Not Available | Positive | 4119977 - 4120825 | 29632.0 |
| Lysis protein | SAMEA2275726_04112 | Not Available | Positive | 4120953 - 4121303 | 12767.3 |
| uncharacterised protein | SAMEA2275726_04113 | Not Available | Positive | 4121492 - 4121833 | 12780.4 |
| uncharacterised protein | SAMEA2275726_04114 | Not Available | Positive | 4121826 - 4122188 | 13557.0 |
| thiopurine s-methyltransferase (tpmt) superfamily protein | SAMEA2275726_04115 | Not Available | Positive | 4122178 - 4122405 | 7644.12 |
| Hypothetical protein | SAMEA2275726_04116 | Not Available | Positive | 4122374 - 4122922 | 19849.6 |
| uncharacterised protein | SAMEA2275726_04117 | Not Available | Positive | 4122928 - 4123461 | 18531.7 |
| Attr | Not Available | Not Available | Positive | 4123630 - 4123657 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
