Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biphenyl-2,3-diol 1,2-dioxygenase bphc (23ohbp oxygenase) | SAMEA2068959_00705 | Not Available | Positive | 686385 - 687296 | 33900.5 |
| possible oxidoreductase | SAMEA2068959_00706 | Not Available | Positive | 687293 - 687859 | 20526.0 |
| zinc ribbon domain protein | SAMEA2068959_00707 | Not Available | Positive | 687945 - 688226 | 9974.99 |
| probable acetamidase/formamidase | SAMEA2068959_00708 | Not Available | Positive | 688241 - 689497 | 44539.3 |
| agmatine deiminase | SAMEA2068959_00709 | Not Available | Negative | 689505 - 689924 | 14834.0 |
| agmatine deiminase | SAMEA2068959_00710 | Not Available | Negative | 689955 - 690617 | 23952.3 |
| uncharacterised protein | SAMEA2068959_00711 | Not Available | Negative | 690738 - 692012 | 46487.5 |
| probable rifampin adp-ribosyl transferase | SAMEA2068959_00712 | Not Available | Positive | 692157 - 692582 | 15648.4 |
| membrane protein | SAMEA2068959_00713 | Not Available | Negative | 692602 - 692976 | 13415.8 |
| probable acyl-coa dehydrogenase fade | SAMEA2068959_00714 | Not Available | Negative | 692999 - 693952 | 33299.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
