Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable glucose-6-phosphate isomerase (pgi) | SAMEA2068959_09403 | Not Available | Positive | 9409868 - 9411505 | 58773.3 |
| putative transcription regulator protein | SAMEA2068959_09404 | Not Available | Negative | 9411502 - 9412011 | 18945.3 |
| probable class ii aldolase | SAMEA2068959_09405 | Not Available | Positive | 9412141 - 9412932 | 28741.2 |
| probable dihydrodipicolinate synthetase dapa | SAMEA2068959_09406 | Not Available | Positive | 9412929 - 9413816 | 31564.7 |
| hypothetical cobalamin synthesis protein p47k/cobw | SAMEA2068959_09407 | Not Available | Positive | 9413839 - 9414975 | 41181.9 |
| conserved protein containing a zn-ribbon-like motif, possibly rna-binding | SAMEA2068959_09408 | Not Available | Negative | 9414972 - 9415502 | 18925.3 |
| hypothetical glyoxalase/bleomycin resistance protein | SAMEA2068959_09409 | Not Available | Positive | 9415604 - 9416098 | 18106.5 |
| putative oxidoreductase | SAMEA2068959_09410 | Not Available | Positive | 9416095 - 9416964 | 30001.8 |
| uncharacterised protein | SAMEA2068959_09411 | Not Available | Negative | 9417138 - 9417284 | 5348.69 |
| putative alanine and proline rich protein | SAMEA2068959_09477 | Not Available | Positive | 9458557 - 9463293 | 170276.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
