Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase/phage integrase | SAMEA2068959_09087 | Not Available | Positive | 9109114 - 9109674 | 20832.1 |
| putative transposase/phage integrase | SAMEA2068959_09088 | Not Available | Positive | 9109708 - 9110436 | 26741.7 |
| tn554 transposase c | SAMEA2068959_09089 | Not Available | Positive | 9110429 - 9110833 | 14918.0 |
| protein of uncharacterised function (duf3558) | SAMEA2068959_09090 | Not Available | Negative | 9111007 - 9111528 | 18407.9 |
| uncharacterised protein | SAMEA2068959_09091 | Not Available | Positive | 9111936 - 9112262 | 11562.4 |
| formate dehydrogenase alpha subunit | SAMEA2068959_09092 | Not Available | Positive | 9112911 - 9115079 | 76748.5 |
| nitrite reductase (nad(p)h) large subunit | SAMEA2068959_09093 | Not Available | Positive | 9115076 - 9116551 | 52464.1 |
| 50s ribosomal protein l22 | SAMEA2068959_09094 | Not Available | Negative | 9116957 - 9117430 | 16623.8 |
| 30s ribosomal protein s19 | SAMEA2068959_09095 | Not Available | Negative | 9117430 - 9117711 | 10788.2 |
| 50s ribosomal protein l2 | SAMEA2068959_09096 | Not Available | Negative | 9117721 - 9118557 | 30240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
