Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative agmatine deiminase | SAMEA2068959_08465 | Not Available | Positive | 8535169 - 8536191 | 36951.5 |
| putative transcriptional regulator, tetr family | SAMEA2068959_08466 | Not Available | Positive | 8536273 - 8536881 | 21928.9 |
| putative pyridoxine/pyridoxamine 5'-phosphate oxidase | SAMEA2068959_08467 | Not Available | Negative | 8536878 - 8537330 | 16225.3 |
| probable transcriptional regulatory protein tetr | SAMEA2068959_08468 | Not Available | Positive | 8537485 - 8538165 | 24640.4 |
| putative short-chain dehydrogenase/reductase | SAMEA2068959_08469 | Not Available | Positive | 8538180 - 8539157 | 34663.1 |
| probable fatty-acid-coa ligase fadd | SAMEA2068959_08470 | Not Available | Positive | 8539147 - 8540793 | 59214.6 |
| inactive lipase | SAMEA2068959_08471 | Not Available | Positive | 8540819 - 8541979 | 41477.0 |
| putative pyruvate decarboxylase | SAMEA2068959_08472 | Not Available | Positive | 8542199 - 8543998 | 65210.1 |
| uncharacterised protein | SAMEA2068959_08473 | Not Available | Negative | 8544007 - 8544201 | 6964.37 |
| probable amino acid transporter | SAMEA2068959_08474 | Not Available | Negative | 8544307 - 8545662 | 48657.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
