Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase/integrase | SAMEA2068959_00581 | Not Available | Negative | 562189 - 562617 | 15328.4 |
| putative transposase/integrase | SAMEA2068959_00582 | Not Available | Negative | 562610 - 564844 | 83900.9 |
| putative transposase/integrase | SAMEA2068959_00583 | Not Available | Negative | 564828 - 566018 | 43495.9 |
| dna-binding protein | SAMEA2068959_00584 | Not Available | Negative | 566059 - 567255 | 45216.2 |
| uncharacterised protein | SAMEA2068959_00585 | Not Available | Negative | 567314 - 568279 | 35273.8 |
| helix-turn-helix protein | SAMEA2068959_00586 | Not Available | Negative | 568448 - 568708 | 9396.47 |
| type ii secretion system protein f | SAMEA2068959_00587 | Not Available | Positive | 569375 - 570016 | 21897.2 |
| type ii secretion system protein f domain-containing protein | SAMEA2068959_00588 | Not Available | Positive | 570013 - 570597 | 19715.3 |
| uncharacterised protein | SAMEA2068959_00589 | Not Available | Positive | 570679 - 570840 | 5406.52 |
| conserved exported protein of uncharacterised function | SAMEA2068959_00590 | Not Available | Positive | 570939 - 571166 | 7901.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
