Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein | SAMEA2068959_09366 | Not Available | Positive | 9371266 - 9372579 | 46781.9 |
| Head-to-tail connector | SAMEA2068959_09367 | Not Available | Positive | 9372652 - 9372966 | 10343.9 |
| Hypothetical protein | SAMEA2068959_09368 | Not Available | Positive | 9372975 - 9373511 | 19227.1 |
| Head-to-tail connector protein | SAMEA2068959_09369 | Not Available | Positive | 9373508 - 9373822 | 11179.1 |
| Hypothetical protein | SAMEA2068959_09370 | Not Available | Positive | 9373801 - 9374193 | 13591.1 |
| Head-to-tail connector complex protein | SAMEA2068959_09371 | Not Available | Positive | 9374190 - 9374585 | 14340.3 |
| Major tail protein | SAMEA2068959_09372 | Not Available | Positive | 9374680 - 9375489 | 28157.2 |
| Tail assembly chaperone | SAMEA2068959_09373 | Not Available | Positive | 9375587 - 9375916 | 11602.9 |
| Tail assembly chaperone | SAMEA2068959_09374 | Not Available | Positive | 9375925 - 9376293 | 13373.1 |
| Tail assembly chaperone | SAMEA2068959_09412 | Not Available | Negative | 9417942 - 9418199 | 9904.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
