Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMEA2068959_01521 | Not Available | Negative | 1500929 - 1502056 | 39681.0 |
| putative hydrolase | SAMEA2068959_01522 | Not Available | Positive | 1502289 - 1503338 | 37926.4 |
| Trna-val | Not Available | Not Available | Positive | 1503370 - 1503441 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1503610 - 1503685 | Not Available |
| long-chain-fatty-acid--coa ligase fadd19 | SAMEA2068959_01525 | Not Available | Positive | 1503727 - 1505379 | 59672.8 |
| putative 2-nitropropane dioxygenase | SAMEA2068959_01526 | Not Available | Positive | 1505383 - 1506498 | 39103.7 |
| cullin, a subunit of e3 ubiquitin ligase | SAMEA2068959_01527 | Not Available | Negative | 1506581 - 1507438 | 31512.6 |
| possible fatty-acid-coa synthetase fadd | SAMEA2068959_01528 | Not Available | Negative | 1507532 - 1509037 | 53769.7 |
| probable acyl-coa dehydrogenase | SAMEA2068959_01529 | Not Available | Negative | 1509047 - 1510144 | 38770.6 |
| probable acyl-coa dehydrogenase fade | SAMEA2068959_01530 | Not Available | Negative | 1510161 - 1511339 | 43182.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
