Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | SAMEA2068959_01441 | Not Available | Negative | 1420439 - 1421686 | 43244.6 |
| conserved membrane protein of uncharacterised function | SAMEA2068959_01442 | Not Available | Negative | 1421744 - 1422184 | 14895.9 |
| probable trans-aconitate methyltransferase | SAMEA2068959_01443 | Not Available | Positive | 1422222 - 1423010 | 28528.7 |
| probable transcriptional regulator, tetr family | SAMEA2068959_01444 | Not Available | Positive | 1423020 - 1423739 | 26945.8 |
| p-aminobenzoate n-oxygenase aurf | SAMEA2068959_01445 | Not Available | Negative | 1423722 - 1424735 | 39029.3 |
| probable shikimate-5-dehydrogenase (aroe) | SAMEA2068959_01446 | Not Available | Negative | 1424899 - 1425717 | 27542.8 |
| putative aminodeoxychorismate lyase | SAMEA2068959_01447 | Not Available | Negative | 1425736 - 1427022 | 46716.8 |
| putative holliday junction resolvase | SAMEA2068959_01448 | Not Available | Negative | 1427019 - 1427447 | 15514.4 |
| alanyl-trna synthetase | SAMEA2068959_01449 | Not Available | Negative | 1427525 - 1430212 | 96193.5 |
| uncharacterised protein | SAMEA2068959_01450 | Not Available | Negative | 1430408 - 1430731 | 10523.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
