Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable lipid-transfer protein ltp1 (thiolase?) | SAMEA2068959_01189 | Not Available | Positive | 1168717 - 1169922 | 42447.2 |
| hypothetical conserved membrane protein | SAMEA2068959_01190 | Not Available | Positive | 1169962 - 1170669 | 26283.4 |
| branched-chain amino acid abc transporter (livf) | SAMEA2068959_01191 | Not Available | Negative | 1170651 - 1171376 | 26128.8 |
| branched-chain amino acid abc transporter (livg) | SAMEA2068959_01192 | Not Available | Negative | 1171377 - 1172324 | 34268.7 |
| high-affinity branched-chain amino acid abc transporter (livm) | SAMEA2068959_01193 | Not Available | Negative | 1172321 - 1173493 | 42338.3 |
| branched-chain amino acid abc transporter (livh) | SAMEA2068959_01194 | Not Available | Negative | 1173490 - 1174560 | 37756.1 |
| putative abc transporter/extracellular ligand-binding receptor | SAMEA2068959_01195 | Not Available | Negative | 1174591 - 1175775 | 40968.2 |
| possible two-component response regulatory protein | SAMEA2068959_01196 | Not Available | Negative | 1175873 - 1176499 | 22823.6 |
| Trna-leu | Not Available | Not Available | Positive | 1176615 - 1176691 | Not Available |
| uncharacterised protein | SAMEA2068959_01198 | Not Available | Positive | 1176801 - 1177319 | 17339.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
