Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase/phenazine biosynthesis protein phzd | SAMEA2068959_00876 | Not Available | Positive | 862628 - 863356 | 26150.0 |
| putative alkylhydroperoxidase ahpd | SAMEA2068959_00877 | Not Available | Negative | 863418 - 863945 | 18677.5 |
| putative alkylhydroperoxidase c | SAMEA2068959_00878 | Not Available | Negative | 863963 - 864550 | 21559.2 |
| probable hydrogen peroxide-inducible genes activator | SAMEA2068959_00879 | Not Available | Positive | 864647 - 865585 | 32980.9 |
| pep phosphonomutase and related enzymes | SAMEA2068959_00880 | Not Available | Negative | 865582 - 866337 | 26507.4 |
| putative transcriptional regulator, gntr family | SAMEA2068959_00881 | Not Available | Negative | 866367 - 867053 | 25024.2 |
| putative decarboxylase | SAMEA2068959_00882 | Not Available | Negative | 867034 - 867771 | 26095.8 |
| putative decarboxylase | SAMEA2068959_00883 | Not Available | Negative | 867764 - 868528 | 27477.0 |
| putative nad-binding protein (d-isomer specific 2-hydroxyacid dehydrogenase?) | SAMEA2068959_00884 | Not Available | Positive | 868714 - 869658 | 34213.9 |
| probable amidase | SAMEA2068959_00885 | Not Available | Positive | 869651 - 871042 | 48759.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
