Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head-to-tail connector protein | SAMEA2068959_08893 | Not Available | Negative | 8933430 - 8933819 | 13580.5 |
| Head-to-tail connector protein | SAMEA2068959_08894 | Not Available | Negative | 8933819 - 8934169 | 12434.0 |
| Gp43 | SAMEA2068959_08895 | Not Available | Negative | 8934166 - 8934759 | 21208.0 |
| uncharacterised protein | SAMEA2068959_08896 | Not Available | Negative | 8934759 - 8935016 | 8718.82 |
| Major capsid protein | SAMEA2068959_08897 | Not Available | Negative | 8935016 - 8936311 | 46663.2 |
| Capsid maturation protease | SAMEA2068959_08898 | Not Available | Negative | 8936338 - 8937117 | 27564.4 |
| Portal protein | SAMEA2068959_08899 | Not Available | Negative | 8937131 - 8938429 | 48398.4 |
| Hypothetical protein | SAMEA2068959_08900 | Not Available | Negative | 8938429 - 8938638 | 7568.12 |
| Terminase large subunit | SAMEA2068959_08901 | Not Available | Negative | 8938631 - 8940199 | 57777.0 |
| uncharacterised protein | SAMEA2068959_08902 | Not Available | Negative | 8940196 - 8940651 | 16002.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
