Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1787623 bp
Thymine Count
1787619 bp
Guanine Count
3200543 bp
Cytosine Count
3201069 bp
Genome Length
9976882 bp
Protein-coding Genes
9635 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable acyl-coa dehydrogenase fade | SAMEA2068959_00715 | Not Available | Negative | 693949 - 694902 | 32916.1 |
| probable acyl-coa dehydrogenase fade | SAMEA2068959_00716 | Not Available | Negative | 694899 - 696050 | 42117.3 |
| probable fatty-acid-coa ligase fadd | SAMEA2068959_00717 | Not Available | Negative | 696050 - 697621 | 57224.9 |
| probable acyl-coa dehydrogenase fade | SAMEA2068959_00718 | Not Available | Positive | 697679 - 698863 | 43705.3 |
| short-chain dehydrogenase/reductase | SAMEA2068959_00719 | Not Available | Positive | 698864 - 699652 | 27518.5 |
| probable transcriptional regulator tetr family | SAMEA2068959_00720 | Not Available | Positive | 699714 - 700337 | 23182.4 |
| probable acetyl-coa acetyltransferase fada | SAMEA2068959_00721 | Not Available | Positive | 700361 - 701509 | 40333.0 |
| uncharacterised protein | SAMEA2068959_00722 | Not Available | Positive | 701536 - 701865 | 11207.3 |
| uncharacterised protein | SAMEA2068959_00723 | Not Available | Negative | 701862 - 702200 | 11607.3 |
| cullin, a subunit of e3 ubiquitin ligase | SAMEA2068959_00724 | Not Available | Positive | 702474 - 703247 | 27905.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
