Clostridium halophilum strain M1

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Caminicellaceae

Genus

Maledivibacter

Description

Clostridium halophilum strain M1 is characterized by a single replicon and is cataloged under the accession number FUZT00000000.1. This organism belongs to the genus Clostridium, which is known for its diverse metabolic capabilities and adaptations to various environments, including extreme conditions. The presence of only one replicon suggests a streamlined genomic organization, which may influence the strain's replication and genetic stability. Such genomic traits can be crucial in understanding the organism's adaptability to its ecological niches, particularly in saline environments, given the species name "halophilum," indicating a preference for high-salinity conditions. C. halophilum's halophilic nature likely allows it to thrive in environments that are inhospitable to many other microorganisms. This adaptability could play a significant role in biogeochemical cycles, particularly in saline ecosystems. The metabolic processes of halophilic Clostridia may contribute to organic matter decomposition and nutrient cycling in these environments, suggesting an ecological role in maintaining the balance of microbial communities in saline habitats. Overall, the unique genomic features and ecological adaptations of Clostridium halophilum strain M1 highlight its potential importance in both environmental microbiology and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyCaminicellaceae
GenusMaledivibacter
SpeciesMaledivibacter halophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium halophilum strain M1 genome assembly, contig:

Gene Summary

Adenine Count

1995528 bp

Thymine Count

1996940 bp

Guanine Count

916453 bp

Cytosine Count

888145 bp

Genome Length

5802910 bp

Protein-coding Genes

5218 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide/nickel transport system permease proteinSAMN02194393_04979Not AvailableNegative5185706 - 518667135223.5
peptide/nickel transport system substrate-binding proteinSAMN02194393_04980Not AvailableNegative5186884 - 518855162359.2
transcriptional regulator, rpir familySAMN02194393_04981Not AvailableNegative5188682 - 518955133037.8
two component transcriptional regulator, lyttr familySAMN02194393_04982Not AvailablePositive5190092 - 519081728721.6
sensor_kinase_spoob-type, alpha-helical domainSAMN02194393_04983Not AvailablePositive5190830 - 519216151737.4
accessory gene regulator bSAMN02194393_04984Not AvailablePositive5192299 - 519293724568.2
cyclic lactone autoinducer peptideSAMN02194393_04985Not AvailablePositive5192909 - 51930374716.96
papain-like cysteine protease avrrpt2SAMN02194393_04986Not AvailablePositive5193334 - 519443440761.4
hypothetical proteinSAMN02194393_04987Not AvailablePositive5194539 - 51946494530.67
b3/b4 domain-containing protein (dna/rna-binding domain of phe-trna-synthetase)SAMN02194393_04988Not AvailablePositive5194969 - 519567627025.4

Displaying genes 4911 – 4920 of 5485 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.