Clostridium halophilum strain M1

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Caminicellaceae

Genus

Maledivibacter

Description

Clostridium halophilum strain M1 is characterized by a single replicon and is cataloged under the accession number FUZT00000000.1. This organism belongs to the genus Clostridium, which is known for its diverse metabolic capabilities and adaptations to various environments, including extreme conditions. The presence of only one replicon suggests a streamlined genomic organization, which may influence the strain's replication and genetic stability. Such genomic traits can be crucial in understanding the organism's adaptability to its ecological niches, particularly in saline environments, given the species name "halophilum," indicating a preference for high-salinity conditions. C. halophilum's halophilic nature likely allows it to thrive in environments that are inhospitable to many other microorganisms. This adaptability could play a significant role in biogeochemical cycles, particularly in saline ecosystems. The metabolic processes of halophilic Clostridia may contribute to organic matter decomposition and nutrient cycling in these environments, suggesting an ecological role in maintaining the balance of microbial communities in saline habitats. Overall, the unique genomic features and ecological adaptations of Clostridium halophilum strain M1 highlight its potential importance in both environmental microbiology and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyCaminicellaceae
GenusMaledivibacter
SpeciesMaledivibacter halophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium halophilum strain M1 genome assembly, contig:

Gene Summary

Adenine Count

1995528 bp

Thymine Count

1996940 bp

Guanine Count

916453 bp

Cytosine Count

888145 bp

Genome Length

5802910 bp

Protein-coding Genes

5218 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate ferredoxin oxidoreductase subunit alphaSAMN02194393_03819Not AvailableNegative3960406 - 396146738444.7
2-oxoglutarate ferredoxin oxidoreductase subunit deltaSAMN02194393_03820Not AvailableNegative3961507 - 39617137496.27
formyl-coa transferaseSAMN02194393_03821Not AvailableNegative3961727 - 396292343839.5
hydroxymethylglutaryl-coa lyaseSAMN02194393_03822Not AvailableNegative3962948 - 396385032955.0
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5SAMN02194393_03823Not AvailableNegative3963899 - 396537753030.7
pas domain s-box-containing proteinSAMN02194393_03824Not AvailableNegative3965938 - 396784273223.0
3-isopropylmalate dehydratase, large subunitSAMN02194393_03826Not AvailablePositive3968393 - 396965545523.1
3-isopropylmalate/(r)-2-methylmalate dehydratase small subunitSAMN02194393_03827Not AvailablePositive3969666 - 397016018161.7
3-isopropylmalate dehydrogenaseSAMN02194393_03828Not AvailablePositive3970310 - 397138339294.5
2-isopropylmalate synthaseSAMN02194393_03830Not AvailablePositive3971882 - 397344457138.8

Displaying genes 3781 – 3790 of 5485 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.