Clostridium halophilum strain M1

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Caminicellaceae

Genus

Maledivibacter

Description

Clostridium halophilum strain M1 is characterized by a single replicon and is cataloged under the accession number FUZT00000000.1. This organism belongs to the genus Clostridium, which is known for its diverse metabolic capabilities and adaptations to various environments, including extreme conditions. The presence of only one replicon suggests a streamlined genomic organization, which may influence the strain's replication and genetic stability. Such genomic traits can be crucial in understanding the organism's adaptability to its ecological niches, particularly in saline environments, given the species name "halophilum," indicating a preference for high-salinity conditions. C. halophilum's halophilic nature likely allows it to thrive in environments that are inhospitable to many other microorganisms. This adaptability could play a significant role in biogeochemical cycles, particularly in saline ecosystems. The metabolic processes of halophilic Clostridia may contribute to organic matter decomposition and nutrient cycling in these environments, suggesting an ecological role in maintaining the balance of microbial communities in saline habitats. Overall, the unique genomic features and ecological adaptations of Clostridium halophilum strain M1 highlight its potential importance in both environmental microbiology and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyCaminicellaceae
GenusMaledivibacter
SpeciesMaledivibacter halophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium halophilum strain M1 genome assembly, contig:

Gene Summary

Adenine Count

1995528 bp

Thymine Count

1996940 bp

Guanine Count

916453 bp

Cytosine Count

888145 bp

Genome Length

5802910 bp

Protein-coding Genes

5218 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative abc transport system permease proteinSAMN02194393_03072Not AvailableNegative3218447 - 321980249910.2
putative abc transport system atp-binding proteinSAMN02194393_03073Not AvailableNegative3219792 - 322047225155.6
hypothetical proteinSAMN02194393_03074Not AvailableNegative3220499 - 322089714806.1
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN02194393_03075Not AvailablePositive3221253 - 322193026353.3
signal transduction histidine kinaseSAMN02194393_03076Not AvailablePositive3221935 - 322302942393.8
mind superfamily p-loop atpase, contains an inserted ferredoxin domainSAMN02194393_03077Not AvailableNegative3223079 - 322393931894.3
mind superfamily p-loop atpase, contains an inserted ferredoxin domainSAMN02194393_03078Not AvailableNegative3223974 - 322479830176.8
predicted fe-mo cluster-binding protein, nifx familySAMN02194393_03079Not AvailableNegative3224821 - 322519513581.3
predicted fe-mo cluster-binding protein, nifx familySAMN02194393_03080Not AvailableNegative3225298 - 322566613372.8
dna-binding transcriptional regulator, merr familySAMN02194393_03081Not AvailablePositive3226648 - 322754134692.9

Displaying genes 3111 – 3120 of 5485 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.