Clostridium halophilum strain M1

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Caminicellaceae

Genus

Maledivibacter

Description

Clostridium halophilum strain M1 is characterized by a single replicon and is cataloged under the accession number FUZT00000000.1. This organism belongs to the genus Clostridium, which is known for its diverse metabolic capabilities and adaptations to various environments, including extreme conditions. The presence of only one replicon suggests a streamlined genomic organization, which may influence the strain's replication and genetic stability. Such genomic traits can be crucial in understanding the organism's adaptability to its ecological niches, particularly in saline environments, given the species name "halophilum," indicating a preference for high-salinity conditions. C. halophilum's halophilic nature likely allows it to thrive in environments that are inhospitable to many other microorganisms. This adaptability could play a significant role in biogeochemical cycles, particularly in saline ecosystems. The metabolic processes of halophilic Clostridia may contribute to organic matter decomposition and nutrient cycling in these environments, suggesting an ecological role in maintaining the balance of microbial communities in saline habitats. Overall, the unique genomic features and ecological adaptations of Clostridium halophilum strain M1 highlight its potential importance in both environmental microbiology and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyCaminicellaceae
GenusMaledivibacter
SpeciesMaledivibacter halophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium halophilum strain M1 genome assembly, contig:

Gene Summary

Adenine Count

1995528 bp

Thymine Count

1996940 bp

Guanine Count

916453 bp

Cytosine Count

888145 bp

Genome Length

5802910 bp

Protein-coding Genes

5218 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)SAMN02194393_02636Not AvailablePositive2771187 - 277235342708.3
condensin subunit scpaSAMN02194393_02637Not AvailablePositive2772620 - 277336629690.3
condensin subunit scpbSAMN02194393_02638Not AvailablePositive2773387 - 277393521083.7
agmatinaseSAMN02194393_02639Not AvailableNegative2773945 - 277480532250.7
spermidine synthaseSAMN02194393_02640Not AvailableNegative2774792 - 277564632878.1
transcriptional regulator, xre family with cupin sensorSAMN02194393_02641Not AvailableNegative2775841 - 277641322183.3
protein of unknown functionSAMN02194393_02642Not AvailablePositive2776640 - 277726324112.1
sporulation protein ytfjSAMN02194393_02643Not AvailablePositive2777423 - 277787516081.8
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)SAMN02194393_02644Not AvailablePositive2777946 - 277901940724.0
nad(p)h-flavin reductaseSAMN02194393_02645Not AvailablePositive2779123 - 278008836540.4

Displaying genes 2681 – 2690 of 5485 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.