Okibacterium fritillariae strain VKM Ac-2059

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Okibacterium

Description

Okibacterium fritillariae strain VKM Ac-2059 is a notable bacterial strain characterized by a single replicon. The strain is cataloged under the accession number FUZP00000000.1, which provides a unique identifier for its genomic data. This bacterium is classified within the genus Okibacterium, which is part of the broader family of microorganisms. The presence of only one replicon is a significant trait, as it can influence the bacterium's genetic stability and replication process. This characteristic may have implications for its adaptability and survival in various environments. Ecologically, Okibacterium fritillariae may play a role in its native habitat, potentially influencing nutrient cycling or interacting with other organisms in its ecosystem. The limited information on this strain suggests that its specific ecological roles and interactions remain to be fully explored. However, the genetic simplicity indicated by the presence of a single replicon might suggest a specialized lifestyle, possibly allowing it to thrive in specific niches. Further research into Okibacterium fritillariae strain VKM Ac-2059 could provide insights into its ecological functions and potential applications in biotechnology or agriculture, particularly if it is found to have beneficial interactions with plants or the soil microbiome. As with many microorganisms, understanding its biology could lead to discoveries that enhance our knowledge of microbial diversity and ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusOkibacterium
SpeciesOkibacterium fritillariae
Strainstrain VKM Ac-2059

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Okibacterium fritillariae strain VKM Ac-2059 genome assembly,

Gene Summary

Adenine Count

507413 bp

Thymine Count

503678 bp

Guanine Count

1058694 bp

Cytosine Count

1068446 bp

Genome Length

3138231 bp

Protein-coding Genes

2808 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system, ompr family, sensor kinaseSAMN06309945_0912Not AvailableNegative965946 - 96784165903.0
two-component system, ompr family, response regulatorSAMN06309945_0913Not AvailableNegative967852 - 96854125513.8
dna excision repair protein ercc-3SAMN06309945_0914Not AvailableNegative968638 - 97027860282.8
helicase conserved c-terminal domain-containing proteinSAMN06309945_0915Not AvailableNegative970336 - 97232770297.8
hypothetical proteinSAMN06309945_0916Not AvailableNegative972344 - 97273914045.3
cold-shock dna-binding protein familySAMN06309945_0917Not AvailablePositive972828 - 97321113527.2
protein of unknown functionSAMN06309945_0918Not AvailablePositive973204 - 97422936039.9
phosphoserine aminotransferase apoenzymeSAMN06309945_0919Not AvailableNegative974315 - 97542739719.6
iron (metal) dependent repressor, dtxr familySAMN06309945_0920Not AvailablePositive975523 - 97621825495.5
cell wall-associated hydrolase, nlpc familySAMN06309945_0921Not AvailablePositive976541 - 97756934412.4

Displaying genes 911 – 920 of 2857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.