Okibacterium fritillariae strain VKM Ac-2059

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Okibacterium

Description

Okibacterium fritillariae strain VKM Ac-2059 is a notable bacterial strain characterized by a single replicon. The strain is cataloged under the accession number FUZP00000000.1, which provides a unique identifier for its genomic data. This bacterium is classified within the genus Okibacterium, which is part of the broader family of microorganisms. The presence of only one replicon is a significant trait, as it can influence the bacterium's genetic stability and replication process. This characteristic may have implications for its adaptability and survival in various environments. Ecologically, Okibacterium fritillariae may play a role in its native habitat, potentially influencing nutrient cycling or interacting with other organisms in its ecosystem. The limited information on this strain suggests that its specific ecological roles and interactions remain to be fully explored. However, the genetic simplicity indicated by the presence of a single replicon might suggest a specialized lifestyle, possibly allowing it to thrive in specific niches. Further research into Okibacterium fritillariae strain VKM Ac-2059 could provide insights into its ecological functions and potential applications in biotechnology or agriculture, particularly if it is found to have beneficial interactions with plants or the soil microbiome. As with many microorganisms, understanding its biology could lead to discoveries that enhance our knowledge of microbial diversity and ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusOkibacterium
SpeciesOkibacterium fritillariae
Strainstrain VKM Ac-2059

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Okibacterium fritillariae strain VKM Ac-2059 genome assembly,

Gene Summary

Adenine Count

507413 bp

Thymine Count

503678 bp

Guanine Count

1058694 bp

Cytosine Count

1068446 bp

Genome Length

3138231 bp

Protein-coding Genes

2808 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN06309945_0349Not AvailableNegative365940 - 36651220727.3
sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domainSAMN06309945_0350Not AvailableNegative366530 - 36773241482.8
amino acid abc transporter atp-binding protein, paat familySAMN06309945_0351Not AvailablePositive367917 - 36870528470.4
glutamate transport system substrate-binding proteinSAMN06309945_0352Not AvailablePositive368767 - 36972333158.9
amino acid abc transporter membrane protein 1, paat familySAMN06309945_0353Not AvailablePositive369932 - 37057621926.8
glutamate transport system permease proteinSAMN06309945_0354Not AvailablePositive370573 - 37148732742.9
asparaginaseSAMN06309945_0355Not AvailablePositive371539 - 37259435747.4
copper homeostasis protein cutcSAMN06309945_0356Not AvailablePositive372591 - 37431858354.6
glucosamine-6-phosphate deaminaseSAMN06309945_0357Not AvailablePositive374363 - 37514227425.4
transcriptional regulator, iclr familySAMN06309945_0358Not AvailableNegative375251 - 37603326927.2

Displaying genes 351 – 360 of 2857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.