Okibacterium fritillariae strain VKM Ac-2059

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Okibacterium

Description

Okibacterium fritillariae strain VKM Ac-2059 is a notable bacterial strain characterized by a single replicon. The strain is cataloged under the accession number FUZP00000000.1, which provides a unique identifier for its genomic data. This bacterium is classified within the genus Okibacterium, which is part of the broader family of microorganisms. The presence of only one replicon is a significant trait, as it can influence the bacterium's genetic stability and replication process. This characteristic may have implications for its adaptability and survival in various environments. Ecologically, Okibacterium fritillariae may play a role in its native habitat, potentially influencing nutrient cycling or interacting with other organisms in its ecosystem. The limited information on this strain suggests that its specific ecological roles and interactions remain to be fully explored. However, the genetic simplicity indicated by the presence of a single replicon might suggest a specialized lifestyle, possibly allowing it to thrive in specific niches. Further research into Okibacterium fritillariae strain VKM Ac-2059 could provide insights into its ecological functions and potential applications in biotechnology or agriculture, particularly if it is found to have beneficial interactions with plants or the soil microbiome. As with many microorganisms, understanding its biology could lead to discoveries that enhance our knowledge of microbial diversity and ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusOkibacterium
SpeciesOkibacterium fritillariae
Strainstrain VKM Ac-2059

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Okibacterium fritillariae strain VKM Ac-2059 genome assembly,

Gene Summary

Adenine Count

507413 bp

Thymine Count

503678 bp

Guanine Count

1058694 bp

Cytosine Count

1068446 bp

Genome Length

3138231 bp

Protein-coding Genes

2808 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN06309945_0229Not AvailablePositive229725 - 23023417639.9
superoxide dismutase, fe-mn familySAMN06309945_0230Not AvailablePositive230274 - 23090623020.9
membrane protease ydil, caax protease familySAMN06309945_0231Not AvailablePositive231032 - 23214440747.2
short-chain dehydrogenaseSAMN06309945_0232Not AvailablePositive232149 - 23289526081.7
polynucleotide 3'-phosphatase /polynucleotide 5'-hydroxyl-kinase /polynucleotide 2',3'-cyclic phosphate phosphodiesteraseSAMN06309945_0233Not AvailableNegative232989 - 23558694811.4
3' terminal rna ribose 2'-o-methyltransferase hen1SAMN06309945_0234Not AvailableNegative235583 - 23703451986.3
uncharacterized conserved protein ygbk, duf1537 familySAMN06309945_0235Not AvailableNegative237282 - 23853542577.4
predicted arabinose efflux permease, mfs familySAMN06309945_0236Not AvailableNegative238725 - 24005947530.7
dna-binding transcriptional regulator, fadr familySAMN06309945_0237Not AvailableNegative240127 - 24087027499.6
predicted homoserine dehydrogenase, contains c-terminal saf domainSAMN06309945_0238Not AvailableNegative240947 - 24231148941.9

Displaying genes 231 – 240 of 2857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.