Desulfovibrio gracilis DSM 16080

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Paucidesulfovibrio

Description

Desulfovibrio gracilis DSM 16080 is an anaerobic, rod-shaped bacterium that thrives in mesophilic conditions, with an optimal growth temperature of 37°C. This organism is characterized by its inability to form spores, which indicates a reliance on specific environmental conditions for survival and replication. It possesses a single replicon, suggesting a streamlined genomic structure that may facilitate its adaptation to anaerobic habitats. As a member of the Desulfovibrio genus, D. gracilis is likely involved in the biogeochemical cycling of sulfur compounds, particularly in anaerobic environments. The capacity of this bacterium to utilize sulfate as a terminal electron acceptor allows it to contribute to the reduction of sulfate to hydrogen sulfide, a process critical in various ecological contexts, including the degradation of organic matter in sediments and the cycling of nutrients in aquatic ecosystems. The accession number for its genetic material is FUYC00000000.1, which may provide further insights into its genetic makeup and metabolic pathways. Understanding the traits and ecological roles of D. gracilis can enhance our knowledge of microbial communities in anaerobic environments and their significance in global biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPaucidesulfovibrio
SpeciesPaucidesulfovibrio gracilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio gracilis DSM 16080 genome assembly, contig:

Gene Summary

Adenine Count

661937 bp

Thymine Count

659652 bp

Guanine Count

934806 bp

Cytosine Count

923086 bp

Genome Length

3179481 bp

Protein-coding Genes

2871 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
toxin 44SAMN02745704_02578Not AvailablePositive2763877 - 276451824014.2
antitoxin pard1/3/4SAMN02745704_02579Not AvailablePositive2765411 - 27656689552.36
toxin pare1/3/4SAMN02745704_02580Not AvailablePositive2765661 - 276595111194.5
protein of unknown functionSAMN02745704_02581Not AvailableNegative2766180 - 276647311145.5
acetyl-coa synthetaseSAMN02745704_02582Not AvailableNegative2766470 - 276834469844.4
two component transcriptional regulator, lyttr familySAMN02745704_02583Not AvailableNegative2768494 - 276936032726.2
hypothetical proteinSAMN02745704_02584Not AvailableNegative2770173 - 277109632792.7
chew proteinSAMN02745704_02585Not AvailablePositive2771218 - 277173319319.0
predicted phospholipase, patatin/cpla2 familySAMN02745704_02586Not AvailablePositive2771920 - 277287035256.4
hypothetical proteinSAMN02745704_02587Not AvailablePositive2773043 - 2775760100302.0

Displaying genes 2571 – 2580 of 2928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.