Desulfovibrio gracilis DSM 16080

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Paucidesulfovibrio

Description

Desulfovibrio gracilis DSM 16080 is an anaerobic, rod-shaped bacterium that thrives in mesophilic conditions, with an optimal growth temperature of 37°C. This organism is characterized by its inability to form spores, which indicates a reliance on specific environmental conditions for survival and replication. It possesses a single replicon, suggesting a streamlined genomic structure that may facilitate its adaptation to anaerobic habitats. As a member of the Desulfovibrio genus, D. gracilis is likely involved in the biogeochemical cycling of sulfur compounds, particularly in anaerobic environments. The capacity of this bacterium to utilize sulfate as a terminal electron acceptor allows it to contribute to the reduction of sulfate to hydrogen sulfide, a process critical in various ecological contexts, including the degradation of organic matter in sediments and the cycling of nutrients in aquatic ecosystems. The accession number for its genetic material is FUYC00000000.1, which may provide further insights into its genetic makeup and metabolic pathways. Understanding the traits and ecological roles of D. gracilis can enhance our knowledge of microbial communities in anaerobic environments and their significance in global biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPaucidesulfovibrio
SpeciesPaucidesulfovibrio gracilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio gracilis DSM 16080 genome assembly, contig:

Gene Summary

Adenine Count

661937 bp

Thymine Count

659652 bp

Guanine Count

934806 bp

Cytosine Count

923086 bp

Genome Length

3179481 bp

Protein-coding Genes

2871 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN02745704_02125Not AvailablePositive2255425 - 225593418705.4
cyclic pyranopterin monophosphate synthase subunit moaaSAMN02745704_02126Not AvailableNegative2255811 - 225680636979.9
5-(carboxyamino)imidazole ribonucleotide mutaseSAMN02745704_02127Not AvailableNegative2256812 - 225730016937.5
phosphoribosylamine--glycine ligaseSAMN02745704_02128Not AvailableNegative2257361 - 225864145210.2
dna-binding transcriptional regulator, lysr familySAMN02745704_02129Not AvailableNegative2258830 - 225980436085.4
hypothetical proteinSAMN02745704_02130Not AvailablePositive2259909 - 22600946906.46
dna-binding transcriptional regulator, lysr familySAMN02745704_02131Not AvailableNegative2260321 - 226142441173.3
hypothetical proteinSAMN02745704_02132Not AvailablePositive2261454 - 22616216277.65
glycolate oxidase iron-sulfur subunitSAMN02745704_02133Not AvailableNegative2261930 - 226303641211.4
d-lactate dehydrogenase (cytochrome)SAMN02745704_02134Not AvailableNegative2263086 - 226445949464.4

Displaying genes 2121 – 2130 of 2928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.