Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN02745130_00884 | Not Available | Negative | 948126 - 948821 | 25963.2 |
| urea transport system atp-binding protein | SAMN02745130_00885 | Not Available | Negative | 948822 - 949613 | 29008.6 |
| urea transport system permease protein | SAMN02745130_00886 | Not Available | Negative | 949610 - 950731 | 41343.8 |
| urea transport system permease protein | SAMN02745130_00887 | Not Available | Negative | 950735 - 952297 | 55664.6 |
| urea transport system substrate-binding protein | SAMN02745130_00888 | Not Available | Negative | 952431 - 953741 | 47833.9 |
| 2-keto-myo-inositol dehydratase | SAMN02745130_00889 | Not Available | Negative | 954061 - 954960 | 32423.8 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | SAMN02745130_00890 | Not Available | Negative | 955045 - 956904 | 66494.5 |
| 5-dehydro-2-deoxygluconokinase | SAMN02745130_00891 | Not Available | Negative | 956901 - 958850 | 71022.2 |
| 5-deoxy-glucuronate isomerase | SAMN02745130_00892 | Not Available | Negative | 958847 - 959644 | 29920.0 |
| myo-inositol 2-dehydrogenase | SAMN02745130_00893 | Not Available | Negative | 959657 - 960649 | 35229.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
