Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit beta | SAMN02745130_00874 | Not Available | Negative | 935505 - 935810 | 10999.0 |
| urease subunit gamma | SAMN02745130_00875 | Not Available | Negative | 935821 - 936123 | 11166.6 |
| urease accessory protein | SAMN02745130_00876 | Not Available | Negative | 936137 - 937000 | 31407.9 |
| uracil-dna glycosylase | SAMN02745130_00877 | Not Available | Negative | 937111 - 937791 | 24602.4 |
| predicted transcriptional regulator, contains hth domain | SAMN02745130_00878 | Not Available | Positive | 937907 - 939154 | 46822.6 |
| helicase conserved c-terminal domain-containing protein | SAMN02745130_00879 | Not Available | Positive | 939151 - 942033 | 109463.0 |
| uncharacterised protein family (upf0175) | SAMN02745130_00880 | Not Available | Positive | 942103 - 942354 | 9458.66 |
| adenine-specific dna-methyltransferase | SAMN02745130_00881 | Not Available | Positive | 942571 - 944286 | 64533.0 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN02745130_00882 | Not Available | Positive | 944283 - 945365 | 41497.6 |
| type iii restriction enzyme | SAMN02745130_00883 | Not Available | Positive | 945362 - 948094 | 102540.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
