Thiothrix eikelboomii strain ATCC 49788

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thiothrix

Description

Thiothrix eikelboomii strain ATCC 49788 is a Gram-negative bacterium characterized by its rod shape. This organism is notable for having a single replicon, which indicates a streamlined genomic structure. The strain has been cataloged under the accession number FUYB00000000.1, providing a reference point for genomic studies and further research. As a member of the Thiothrix genus, T. eikelboomii plays a role in the sulfur cycle, particularly in environments where sulfur compounds are prevalent. The ecological significance of this bacterium lies in its ability to oxidize sulfur compounds, contributing to the biogeochemical cycling of sulfur in aquatic ecosystems. This metabolic capability is essential for maintaining the balance of sulfur in both natural and engineered environments, such as wastewater treatment systems. In summary, the traits of Thiothrix eikelboomii strain ATCC 49788 highlight its importance in microbial ecology, particularly in sulfur cycling processes. Understanding its characteristics can provide insights into its role in environmental sustainability and the management of sulfur-rich environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThiothrix
SpeciesThiothrix eikelboomii
Strainstrain ATCC 49788

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiothrix eikelboomii strain ATCC 49788 genome assembly, contig:

Gene Summary

Adenine Count

1115587 bp

Thymine Count

1108026 bp

Guanine Count

942897 bp

Cytosine Count

981359 bp

Genome Length

4158727 bp

Protein-coding Genes

3869 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, iclr familySAMN02745130_00864Not AvailablePositive926297 - 92711528716.7
succinate dehydrogenase/fumarate reductase, flavoprotein subunitSAMN02745130_00865Not AvailablePositive927112 - 92883061782.9
nipsnap proteinSAMN02745130_00866Not AvailablePositive928841 - 92945222256.7
sugar phosphate isomerase/epimeraseSAMN02745130_00867Not AvailablePositive929477 - 93030130044.8
urease accessory proteinSAMN02745130_00868Not AvailableNegative930298 - 93090922024.7
urease accessory proteinSAMN02745130_00869Not AvailableNegative930924 - 93164926779.7
urease accessory proteinSAMN02745130_00870Not AvailableNegative931588 - 93207618065.4
pin domain-containing proteinSAMN02745130_00871Not AvailableNegative932113 - 93258017622.1
aaa domain-containing protein, putative abieii toxin, type iv ta systemSAMN02745130_00872Not AvailableNegative932580 - 93368041130.5
urease subunit alphaSAMN02745130_00873Not AvailableNegative933802 - 93550560712.9

Displaying genes 951 – 960 of 3976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.