Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | SAMN02745130_00844 | Not Available | Positive | 906207 - 906806 | 22930.8 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | SAMN02745130_00845 | Not Available | Positive | 906963 - 907673 | 24961.3 |
| 4-oxalmesaconate hydratase | SAMN02745130_00846 | Not Available | Positive | 907670 - 908716 | 39669.3 |
| protocatechuate 4,5-dioxygenase alpha subunit | SAMN02745130_00847 | Not Available | Positive | 908713 - 909099 | 14658.4 |
| protocatechuate 4,5-dioxygenase beta subunit | SAMN02745130_00848 | Not Available | Positive | 909099 - 909944 | 31153.5 |
| 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase | SAMN02745130_00849 | Not Available | Positive | 910170 - 911114 | 34657.5 |
| uncharacterized conserved protein | SAMN02745130_00850 | Not Available | Negative | 911183 - 911695 | 18204.1 |
| putative copper resistance protein d | SAMN02745130_00851 | Not Available | Negative | 911711 - 912601 | 32292.4 |
| hypothetical protein | SAMN02745130_00852 | Not Available | Negative | 912674 - 913069 | 14129.7 |
| copper resistance protein b precursor (copb) | SAMN02745130_00853 | Not Available | Negative | 913104 - 914336 | 44535.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
