Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter solute receptor, dctp family | SAMN02745130_00814 | Not Available | Negative | 867364 - 868365 | 36437.2 |
| trap transporter, dctm subunit | SAMN02745130_00815 | Not Available | Negative | 868457 - 869749 | 44997.7 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN02745130_00816 | Not Available | Negative | 869753 - 870256 | 18548.1 |
| shikimate dehydrogenase | SAMN02745130_00817 | Not Available | Negative | 870288 - 871178 | 31882.6 |
| transcriptional regulator, tetr family | SAMN02745130_00818 | Not Available | Positive | 871379 - 872077 | 26866.5 |
| predicted dehydrogenase | SAMN02745130_00819 | Not Available | Negative | 872096 - 873277 | 42270.4 |
| sugar phosphate isomerase/epimerase | SAMN02745130_00820 | Not Available | Negative | 873285 - 874346 | 39176.3 |
| predicted dehydrogenase | SAMN02745130_00821 | Not Available | Negative | 874400 - 876256 | 66901.6 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN02745130_00822 | Not Available | Negative | 876290 - 877393 | 40354.0 |
| glucose/mannose transport system permease protein | SAMN02745130_00823 | Not Available | Negative | 877406 - 878317 | 33631.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
