Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | SAMN02745130_00784 | Not Available | Positive | 839576 - 839881 | 11454.8 |
| lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domain | SAMN02745130_00785 | Not Available | Positive | 839965 - 841110 | 43488.4 |
| orotidine-5'-phosphate decarboxylase | SAMN02745130_00786 | Not Available | Positive | 841141 - 841833 | 24533.0 |
| trap transporter solute receptor, taxi family | SAMN02745130_00787 | Not Available | Positive | 841965 - 842366 | 14645.1 |
| trap transporter solute receptor, taxi family | SAMN02745130_00788 | Not Available | Positive | 842309 - 842926 | 21800.3 |
| trap transporter, 4tm/12tm fusion protein | SAMN02745130_00789 | Not Available | Positive | 843014 - 845080 | 73279.9 |
| protein of unknown function | SAMN02745130_00790 | Not Available | Positive | 845082 - 845462 | 13551.1 |
| high frequency lysogenization protein | SAMN02745130_00791 | Not Available | Negative | 845561 - 846208 | 23833.0 |
| pp_00776 | SAMN02745130_00792 | Not Available | Negative | 846286 - 847380 | Not Available |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN02745130_00793 | Not Available | Negative | 847377 - 847826 | 16918.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
