Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-feruloyl-coa synthase | SAMN02745130_00704 | Not Available | Positive | 754628 - 756496 | 68095.8 |
| vanillin synthase/trans-feruloyl-coa hydratase | SAMN02745130_00705 | Not Available | Positive | 756516 - 757286 | 27392.1 |
| acetyl-coa c-acetyltransferase | SAMN02745130_00706 | Not Available | Positive | 757283 - 758551 | 44449.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN02745130_00707 | Not Available | Positive | 758560 - 759327 | 26425.1 |
| 4-hydroxybenzoyl-coa thioesterase | SAMN02745130_00708 | Not Available | Positive | 759336 - 759755 | 16128.1 |
| acyl-coa dehydrogenase | SAMN02745130_00709 | Not Available | Positive | 759770 - 761557 | 64780.5 |
| trap transporter, dctm subunit | SAMN02745130_00710 | Not Available | Negative | 761624 - 763015 | 49431.9 |
| tripartite atp-independent transporter, dctq component | SAMN02745130_00711 | Not Available | Negative | 763008 - 763517 | 18871.6 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN02745130_00712 | Not Available | Negative | 763596 - 764624 | 37022.5 |
| acetyl-coa c-acetyltransferase | SAMN02745130_00713 | Not Available | Negative | 764908 - 766110 | 41897.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
