Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| positive regulator of sigma(e), rsec/mucc | SAMN02745130_00614 | Not Available | Negative | 649387 - 649881 | 17628.5 |
| sigma e regulatory protein, mucb/rseb | SAMN02745130_00615 | Not Available | Negative | 649946 - 650911 | 35119.2 |
| sigma-e factor negative regulatory protein rsea | SAMN02745130_00616 | Not Available | Negative | 650901 - 651485 | 21029.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02745130_00617 | Not Available | Negative | 651522 - 652097 | 21832.0 |
| l-aspartate oxidase | SAMN02745130_00618 | Not Available | Positive | 652222 - 653829 | 59510.9 |
| trna pseudouridine synthase b | SAMN02745130_00619 | Not Available | Negative | 653872 - 654780 | 33312.5 |
| ribosome-binding factor a | SAMN02745130_00620 | Not Available | Negative | 654795 - 655229 | 16170.0 |
| translation initiation factor if-2 | SAMN02745130_00621 | Not Available | Negative | 655229 - 658069 | 102715.0 |
| nusa antitermination factor | SAMN02745130_00622 | Not Available | Negative | 658089 - 659573 | 55578.6 |
| ribosome maturation factor rimp | SAMN02745130_00623 | Not Available | Negative | 659570 - 660058 | 18047.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
