Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysyl hydroxylase/galactosyltransferase/glucosyltransferase/ proc ollagen-lysine,2-oxoglutarate 5-dioxygenase/rna polymerase ii-associated factor 1 | SAMN02745130_00384 | Not Available | Positive | 399345 - 399971 | 24296.9 |
| atp-dependent dna helicase recq | SAMN02745130_00385 | Not Available | Negative | 399978 - 401786 | 68395.7 |
| glycyl-trna synthetase alpha chain | SAMN02745130_00386 | Not Available | Positive | 401883 - 402842 | 36575.5 |
| glycyl-trna synthetase beta chain | SAMN02745130_00387 | Not Available | Positive | 402844 - 404910 | 76055.4 |
| type ii secretion system (t2ss), protein n | SAMN02745130_00388 | Not Available | Negative | 404966 - 405868 | 31573.1 |
| general secretion pathway protein m | SAMN02745130_00389 | Not Available | Negative | 405865 - 406353 | 18028.0 |
| type ii secretion system protein l | SAMN02745130_00390 | Not Available | Negative | 406350 - 407552 | 44677.7 |
| general secretion pathway protein k | SAMN02745130_00391 | Not Available | Negative | 407594 - 408604 | 37442.8 |
| soluble lytic murein transglycosylase | SAMN02745130_00392 | Not Available | Negative | 408641 - 410599 | 74280.7 |
| ribosome biogenesis gtpase | SAMN02745130_00393 | Not Available | Negative | 410632 - 411528 | 33117.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
