Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN02745130_00264 | Not Available | Negative | 283773 - 284375 | 22987.3 |
| trk system potassium uptake protein trkh | SAMN02745130_00265 | Not Available | Negative | 284569 - 285978 | 51775.3 |
| trk system potassium uptake protein trka | SAMN02745130_00266 | Not Available | Negative | 286023 - 287402 | 50937.9 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN02745130_00267 | Not Available | Negative | 287431 - 288807 | 51875.3 |
| pas domain s-box-containing protein | SAMN02745130_00268 | Not Available | Negative | 288821 - 291025 | 82350.6 |
| protein of unknown function | SAMN02745130_00269 | Not Available | Negative | 291007 - 291585 | 21958.1 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN02745130_00270 | Not Available | Negative | 291600 - 292898 | 48193.2 |
| methionyl-trna formyltransferase | SAMN02745130_00271 | Not Available | Negative | 292895 - 293848 | 33905.9 |
| peptide deformylase | SAMN02745130_00272 | Not Available | Negative | 293845 - 294384 | 19948.1 |
| lysm domain-containing protein | SAMN02745130_00273 | Not Available | Positive | 294500 - 295651 | 42402.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
