Thiothrix eikelboomii strain ATCC 49788

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thiothrix

Description

Thiothrix eikelboomii strain ATCC 49788 is a Gram-negative bacterium characterized by its rod shape. This organism is notable for having a single replicon, which indicates a streamlined genomic structure. The strain has been cataloged under the accession number FUYB00000000.1, providing a reference point for genomic studies and further research. As a member of the Thiothrix genus, T. eikelboomii plays a role in the sulfur cycle, particularly in environments where sulfur compounds are prevalent. The ecological significance of this bacterium lies in its ability to oxidize sulfur compounds, contributing to the biogeochemical cycling of sulfur in aquatic ecosystems. This metabolic capability is essential for maintaining the balance of sulfur in both natural and engineered environments, such as wastewater treatment systems. In summary, the traits of Thiothrix eikelboomii strain ATCC 49788 highlight its importance in microbial ecology, particularly in sulfur cycling processes. Understanding its characteristics can provide insights into its role in environmental sustainability and the management of sulfur-rich environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThiothrix
SpeciesThiothrix eikelboomii
Strainstrain ATCC 49788

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiothrix eikelboomii strain ATCC 49788 genome assembly, contig:

Gene Summary

Adenine Count

1115587 bp

Thymine Count

1108026 bp

Guanine Count

942897 bp

Cytosine Count

981359 bp

Genome Length

4158727 bp

Protein-coding Genes

3869 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonuclease, uma2 family (restriction endonuclease fold)SAMN02745130_00264Not AvailableNegative283773 - 28437522987.3
trk system potassium uptake protein trkhSAMN02745130_00265Not AvailableNegative284569 - 28597851775.3
trk system potassium uptake protein trkaSAMN02745130_00266Not AvailableNegative286023 - 28740250937.9
dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domainsSAMN02745130_00267Not AvailableNegative287431 - 28880751875.3
pas domain s-box-containing proteinSAMN02745130_00268Not AvailableNegative288821 - 29102582350.6
protein of unknown functionSAMN02745130_00269Not AvailableNegative291007 - 29158521958.1
16s rrna (cytosine967-c5)-methyltransferaseSAMN02745130_00270Not AvailableNegative291600 - 29289848193.2
methionyl-trna formyltransferaseSAMN02745130_00271Not AvailableNegative292895 - 29384833905.9
peptide deformylaseSAMN02745130_00272Not AvailableNegative293845 - 29438419948.1
lysm domain-containing proteinSAMN02745130_00273Not AvailablePositive294500 - 29565142402.5

Displaying genes 351 – 360 of 3976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.