Thiothrix eikelboomii strain ATCC 49788

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thiothrix

Description

Thiothrix eikelboomii strain ATCC 49788 is a Gram-negative bacterium characterized by its rod shape. This organism is notable for having a single replicon, which indicates a streamlined genomic structure. The strain has been cataloged under the accession number FUYB00000000.1, providing a reference point for genomic studies and further research. As a member of the Thiothrix genus, T. eikelboomii plays a role in the sulfur cycle, particularly in environments where sulfur compounds are prevalent. The ecological significance of this bacterium lies in its ability to oxidize sulfur compounds, contributing to the biogeochemical cycling of sulfur in aquatic ecosystems. This metabolic capability is essential for maintaining the balance of sulfur in both natural and engineered environments, such as wastewater treatment systems. In summary, the traits of Thiothrix eikelboomii strain ATCC 49788 highlight its importance in microbial ecology, particularly in sulfur cycling processes. Understanding its characteristics can provide insights into its role in environmental sustainability and the management of sulfur-rich environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThiothrix
SpeciesThiothrix eikelboomii
Strainstrain ATCC 49788

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiothrix eikelboomii strain ATCC 49788 genome assembly, contig:

Gene Summary

Adenine Count

1115587 bp

Thymine Count

1108026 bp

Guanine Count

942897 bp

Cytosine Count

981359 bp

Genome Length

4158727 bp

Protein-coding Genes

3869 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN02745130_00123Not AvailableNegative131796 - 13239521978.4
threonylcarbamoyladenosine trna methylthiotransferase mtabSAMN02745130_00124Not AvailableNegative132398 - 13368147075.5
peptidyl-prolyl cis-trans isomerase dSAMN02745130_00125Not AvailableNegative133729 - 13560668397.4
Trna-aspNot AvailableNot AvailablePositive135724 - 135800Not Available
Trna-aspNot AvailableNot AvailablePositive135857 - 135933Not Available
Trna-valNot AvailableNot AvailablePositive135954 - 136029Not Available
dna-binding protein hu-betaSAMN02745130_00129Not AvailableNegative136045 - 1363179620.6
atp-dependent lon proteaseSAMN02745130_00130Not AvailableNegative136481 - 13891389896.2
atp-dependent clp protease atp-binding subunit clpxSAMN02745130_00131Not AvailableNegative139034 - 14032047214.6
atp-dependent clp protease, protease subunitSAMN02745130_00132Not AvailableNegative140530 - 14115022523.3

Displaying genes 211 – 220 of 3976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.