Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | strain ATCC 49788 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl isomerase f (cyclophilin d) | SAMN02745130_01098 | Not Available | Negative | 1154842 - 1155336 | 17718.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02745130_01099 | Not Available | Positive | 1155669 - 1157693 | 77695.0 |
| glucose/mannose transport system substrate-binding protein | SAMN02745130_01100 | Not Available | Positive | 1157690 - 1158943 | 47184.1 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02745130_01101 | Not Available | Positive | 1159114 - 1159878 | 28057.2 |
| hypothetical protein | SAMN02745130_01102 | Not Available | Negative | 1159934 - 1160182 | 8901.08 |
| signal transduction histidine kinase | SAMN02745130_01103 | Not Available | Positive | 1160369 - 1163065 | 101085.0 |
| protein of unknown function | SAMN02745130_01104 | Not Available | Negative | 1163081 - 1163503 | 15739.9 |
| hypothetical protein | SAMN02745130_01105 | Not Available | Negative | 1163566 - 1163811 | 9226.13 |
| negative transcriptional regulator, paib family | SAMN02745130_01106 | Not Available | Negative | 1163874 - 1164512 | 24119.7 |
| trna pseudouridine65 synthase | SAMN02745130_01107 | Not Available | Negative | 1164499 - 1165251 | 28280.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
