Thiothrix eikelboomii strain ATCC 49788

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thiothrix

Description

Thiothrix eikelboomii strain ATCC 49788 is a Gram-negative bacterium characterized by its rod shape. This organism is notable for having a single replicon, which indicates a streamlined genomic structure. The strain has been cataloged under the accession number FUYB00000000.1, providing a reference point for genomic studies and further research. As a member of the Thiothrix genus, T. eikelboomii plays a role in the sulfur cycle, particularly in environments where sulfur compounds are prevalent. The ecological significance of this bacterium lies in its ability to oxidize sulfur compounds, contributing to the biogeochemical cycling of sulfur in aquatic ecosystems. This metabolic capability is essential for maintaining the balance of sulfur in both natural and engineered environments, such as wastewater treatment systems. In summary, the traits of Thiothrix eikelboomii strain ATCC 49788 highlight its importance in microbial ecology, particularly in sulfur cycling processes. Understanding its characteristics can provide insights into its role in environmental sustainability and the management of sulfur-rich environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThiothrix
SpeciesThiothrix eikelboomii
Strainstrain ATCC 49788

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiothrix eikelboomii strain ATCC 49788 genome assembly, contig:

Gene Summary

Adenine Count

1115587 bp

Thymine Count

1108026 bp

Guanine Count

942897 bp

Cytosine Count

981359 bp

Genome Length

4158727 bp

Protein-coding Genes

3869 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna nucleotidyltransferase (cca-adding enzyme)SAMN02745130_00018Not AvailablePositive17924 - 1917147152.4
heat shock protein hspqSAMN02745130_00019Not AvailablePositive19237 - 1955412345.2
hypothetical proteinSAMN02745130_00020Not AvailablePositive19560 - 2026125460.0
peroxiredoxinSAMN02745130_00021Not AvailableNegative20263 - 2079619971.0
outer membrane protein ompaSAMN02745130_00022Not AvailableNegative20865 - 23711101744.0
hypothetical proteinSAMN02745130_00023Not AvailablePositive24028 - 2443815645.7
thrombospondin type 3 repeat-containing proteinSAMN02745130_00024Not AvailablePositive24490 - 2617459360.7
ompa-ompf porin, oop familySAMN02745130_00025Not AvailablePositive27632 - 2830622932.1
16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferaseSAMN02745130_00026Not AvailablePositive28311 - 2909629404.7
oxygen-independent coproporphyrinogen-3 oxidaseSAMN02745130_00027Not AvailablePositive29096 - 3024143308.6

Displaying genes 101 – 110 of 3976 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.