Lysobacter spongiicola DSM 21749

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Novilysobacter

Description

Lysobacter spongiicola DSM 21749 is a Gram-negative, aerobic bacterium characterized by its rod shape. This species thrives under mesophilic conditions, with an optimal growth temperature of 25°C. It possesses a single replicon, indicating a streamlined genetic structure, which may contribute to its adaptability in various environments. This bacterium is part of the Lysobacter genus, known for its ecological roles in soil and aquatic environments. As an aerobic organism, Lysobacter spongiicola DSM 21749 likely participates in the decomposition of organic matter, contributing to nutrient cycling within its ecosystem. The ability to thrive at an optimal temperature of 25°C suggests that it may be well-suited to temperate environments, where such temperatures are commonly found. Given its characteristics, Lysobacter spongiicola DSM 21749 may play a significant role in the microbiome of its natural habitat, potentially influencing the dynamics of microbial communities and contributing to soil health or the degradation of organic pollutants. Further studies could elucidate its specific interactions within these ecosystems and its potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusNovilysobacter
SpeciesNovilysobacter spongiicola
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter spongiicola DSM 21749 genome assembly, contig:

Gene Summary

Adenine Count

504599 bp

Thymine Count

501069 bp

Guanine Count

1040139 bp

Cytosine Count

1053866 bp

Genome Length

3099673 bp

Protein-coding Genes

2873 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyldiaminopimelate desuccinylaseSAMN02745674_00647Not AvailableNegative687112 - 68825440942.4
transcriptional regulator, spx/mgsr familySAMN02745674_00648Not AvailableNegative688382 - 68874113911.5
2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferaseSAMN02745674_00649Not AvailableNegative688744 - 68966432955.6
utp--glnb (protein pii) uridylyltransferase, glndSAMN02745674_00650Not AvailableNegative689661 - 69231297502.0
methionyl aminopeptidaseSAMN02745674_00651Not AvailableNegative692309 - 69308528225.9
hypothetical proteinSAMN02745674_00652Not AvailableNegative693242 - 6934969254.86
small subunit ribosomal protein s2SAMN02745674_00653Not AvailablePositive693878 - 69476832396.9
translation elongation factor ts (ef-ts)SAMN02745674_00654Not AvailablePositive694916 - 69578530546.5
outer membrane receptor proteins, mostly fe transportSAMN02745674_00655Not AvailableNegative695931 - 698927109850.0
uridylate kinaseSAMN02745674_00656Not AvailablePositive699257 - 69997925964.6

Displaying genes 651 – 660 of 2924 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.