Lysobacter spongiicola DSM 21749

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Novilysobacter

Description

Lysobacter spongiicola DSM 21749 is a Gram-negative, aerobic bacterium characterized by its rod shape. This species thrives under mesophilic conditions, with an optimal growth temperature of 25°C. It possesses a single replicon, indicating a streamlined genetic structure, which may contribute to its adaptability in various environments. This bacterium is part of the Lysobacter genus, known for its ecological roles in soil and aquatic environments. As an aerobic organism, Lysobacter spongiicola DSM 21749 likely participates in the decomposition of organic matter, contributing to nutrient cycling within its ecosystem. The ability to thrive at an optimal temperature of 25°C suggests that it may be well-suited to temperate environments, where such temperatures are commonly found. Given its characteristics, Lysobacter spongiicola DSM 21749 may play a significant role in the microbiome of its natural habitat, potentially influencing the dynamics of microbial communities and contributing to soil health or the degradation of organic pollutants. Further studies could elucidate its specific interactions within these ecosystems and its potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusNovilysobacter
SpeciesNovilysobacter spongiicola
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter spongiicola DSM 21749 genome assembly, contig:

Gene Summary

Adenine Count

504599 bp

Thymine Count

501069 bp

Guanine Count

1040139 bp

Cytosine Count

1053866 bp

Genome Length

3099673 bp

Protein-coding Genes

2873 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN02745674_02462Not AvailablePositive2612805 - 261353925996.2
large conductance mechanosensitive channelSAMN02745674_02463Not AvailablePositive2613555 - 261398915228.6
zn-dependent amino-or carboxypeptidase, m28 familySAMN02745674_02464Not AvailablePositive2614097 - 261550048793.2
diguanylate cyclase (ggdef) domain-containing proteinSAMN02745674_02465Not AvailablePositive2615510 - 261724664015.5
his kinase a (phospho-acceptor) domain-containing proteinSAMN02745674_02466Not AvailableNegative2617260 - 261851945733.2
hypothetical proteinSAMN02745674_02467Not AvailableNegative2618516 - 261888113217.6
anti-sigma-28 factor, flgm familySAMN02745674_02468Not AvailableNegative2618878 - 261919810705.6
flagella basal body p-ring formation protein flgaSAMN02745674_02469Not AvailableNegative2619272 - 261994322949.1
two-component system, chemotaxis family, response regulator chevSAMN02745674_02470Not AvailablePositive2620103 - 262103534024.1
flagellar basal-body rod protein flgbSAMN02745674_02471Not AvailablePositive2621118 - 262148912697.9

Displaying genes 2451 – 2460 of 2924 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.