Lysobacter spongiicola DSM 21749

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Novilysobacter

Description

Lysobacter spongiicola DSM 21749 is a Gram-negative, aerobic bacterium characterized by its rod shape. This species thrives under mesophilic conditions, with an optimal growth temperature of 25°C. It possesses a single replicon, indicating a streamlined genetic structure, which may contribute to its adaptability in various environments. This bacterium is part of the Lysobacter genus, known for its ecological roles in soil and aquatic environments. As an aerobic organism, Lysobacter spongiicola DSM 21749 likely participates in the decomposition of organic matter, contributing to nutrient cycling within its ecosystem. The ability to thrive at an optimal temperature of 25°C suggests that it may be well-suited to temperate environments, where such temperatures are commonly found. Given its characteristics, Lysobacter spongiicola DSM 21749 may play a significant role in the microbiome of its natural habitat, potentially influencing the dynamics of microbial communities and contributing to soil health or the degradation of organic pollutants. Further studies could elucidate its specific interactions within these ecosystems and its potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusNovilysobacter
SpeciesNovilysobacter spongiicola
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter spongiicola DSM 21749 genome assembly, contig:

Gene Summary

Adenine Count

504599 bp

Thymine Count

501069 bp

Guanine Count

1040139 bp

Cytosine Count

1053866 bp

Genome Length

3099673 bp

Protein-coding Genes

2873 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidylate kinaseSAMN02745674_00177Not AvailablePositive174353 - 17503924174.7
ssu ribosomal protein s1pSAMN02745674_00178Not AvailablePositive175170 - 17690663869.0
integration host factor subunit betaSAMN02745674_00179Not AvailablePositive176961 - 17730812791.5
protein of unknown functionSAMN02745674_00180Not AvailablePositive177403 - 1776669189.59
lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domainSAMN02745674_00181Not AvailablePositive177670 - 17884843631.1
udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferaseSAMN02745674_00182Not AvailablePositive178994 - 17983329381.2
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN02745674_00183Not AvailablePositive179837 - 18175070169.7
utp--glucose-1-phosphate uridylyltransferaseSAMN02745674_00184Not AvailablePositive181750 - 18264932465.2
gamma-glutamylputrescine oxidaseSAMN02745674_00185Not AvailablePositive182771 - 18399144660.8
acetyl-coa acyltransferaseSAMN02745674_00186Not AvailableNegative184026 - 18522842171.1

Displaying genes 181 – 190 of 2924 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.