Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Sediminibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Sediminibacterium |
| Species | Sediminibacterium ginsengisoli |
| Strain | strain DSM 22335 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1097857 bp
Thymine Count
1093381 bp
Guanine Count
940539 bp
Cytosine Count
950860 bp
Genome Length
4089980 bp
Protein-coding Genes
3586 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488132_10169 | Not Available | Negative | 59651 - 60385 | 28270.7 |
| hypothetical protein | SAMN04488132_10170 | Not Available | Positive | 60465 - 61811 | 51086.2 |
| exodeoxyribonuclease-3 | SAMN04488132_10171 | Not Available | Positive | 61826 - 62599 | 29715.1 |
| protein of unknown function | SAMN04488132_10172 | Not Available | Positive | 62601 - 62906 | 11854.0 |
| dna-binding protein hu-beta | SAMN04488132_10173 | Not Available | Positive | 63206 - 63475 | 9466.53 |
| ribosomal small subunit protein bthx | SAMN04488132_10174 | Not Available | Positive | 63567 - 63674 | 3736.64 |
| selenocysteine lyase/cysteine desulfurase | SAMN04488132_10175 | Not Available | Negative | 63731 - 65029 | 48294.2 |
| hypothetical protein | SAMN04488132_10176 | Not Available | Positive | 65133 - 65372 | 8624.77 |
| methyltransferase, fkbm family | SAMN04488132_10177 | Not Available | Positive | 65397 - 66098 | 27084.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488132_10178 | Not Available | Positive | 66113 - 67036 | 34460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
