Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Sediminibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Sediminibacterium |
| Species | Sediminibacterium ginsengisoli |
| Strain | strain DSM 22335 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1097857 bp
Thymine Count
1093381 bp
Guanine Count
940539 bp
Cytosine Count
950860 bp
Genome Length
4089980 bp
Protein-coding Genes
3586 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488132_10159 | Not Available | Negative | 47494 - 47772 | 10683.7 |
| ligand-binding srpbcc domain-containing protein | SAMN04488132_10160 | Not Available | Negative | 47800 - 48261 | 18220.9 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN04488132_10161 | Not Available | Positive | 48355 - 51501 | 121229.0 |
| ig-like domain-containing protein | SAMN04488132_10162 | Not Available | Positive | 51524 - 52993 | 55325.1 |
| dna replication and repair protein recr | SAMN04488132_10163 | Not Available | Positive | 53020 - 53634 | 22740.6 |
| trna_anti-like | SAMN04488132_10164 | Not Available | Positive | 53759 - 54175 | 14906.1 |
| ycei-like domain-containing protein | SAMN04488132_10165 | Not Available | Positive | 54203 - 54730 | 18743.6 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN04488132_10166 | Not Available | Positive | 54963 - 55976 | 36999.1 |
| methionine synthase (b12-dependent) | SAMN04488132_10167 | Not Available | Positive | 56008 - 58725 | 100595.0 |
| hypothetical protein | SAMN04488132_10168 | Not Available | Positive | 58784 - 59593 | 31165.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
