Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Sediminibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Sediminibacterium |
| Species | Sediminibacterium ginsengisoli |
| Strain | strain DSM 22335 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1097857 bp
Thymine Count
1093381 bp
Guanine Count
940539 bp
Cytosine Count
950860 bp
Genome Length
4089980 bp
Protein-coding Genes
3586 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig catalytic domain-containing protein | SAMN04488132_10139 | Not Available | Negative | 28455 - 28796 | 13129.8 |
| dgqhr domain-containing protein | SAMN04488132_10140 | Not Available | Negative | 28793 - 29920 | 42385.7 |
| hypothetical protein | SAMN04488132_10141 | Not Available | Negative | 30141 - 30518 | 14189.1 |
| protein of unknown function | SAMN04488132_10142 | Not Available | Negative | 30805 - 31275 | 18277.8 |
| Trna-arg | Not Available | Not Available | Positive | 32235 - 32309 | Not Available |
| glutathione peroxidase | SAMN04488132_10144 | Not Available | Positive | 32511 - 33098 | 21759.2 |
| putative tim-barrel protein, nifr3 family | SAMN04488132_10145 | Not Available | Negative | 33099 - 34175 | 40212.0 |
| hypothetical protein | SAMN04488132_10146 | Not Available | Positive | 34248 - 35159 | 34026.9 |
| putative signal transducing protein | SAMN04488132_10147 | Not Available | Positive | 35159 - 35365 | 7627.25 |
| phosphatidate cytidylyltransferase | SAMN04488132_10148 | Not Available | Positive | 35403 - 36266 | 31648.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
