Sphingobacterium faecium PCAi_F2.5

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium faecium PCAi_F2.5 is a rod-shaped bacterium characterized by a single replicon in its genetic structure. This species belongs to the genus Sphingobacterium, which is known for its diverse metabolic capabilities and ability to thrive in various environments. The genomic information for Sphingobacterium faecium PCAi_F2.5 is cataloged under the accession number FUKX00000000.1, which provides a reference for further study and analysis within microbial databases. The rod shape of Sphingobacterium faecium PCAi_F2.5 may influence its motility and interaction with the surrounding environment, potentially affecting its ecological niches. The presence of a single replicon suggests a streamlined genetic organization, which could be advantageous for rapid adaptation to environmental changes or stressors. Understanding the traits of Sphingobacterium faecium PCAi_F2.5 contributes to the broader knowledge of microbial diversity and the roles these bacteria play in various ecosystems. Their metabolic versatility often allows them to occupy unique ecological niches, where they can participate in nutrient cycling and contribute to soil health. As part of the Sphingobacterium genus, this species may also be involved in the biodegradation of complex organic compounds, highlighting the importance of such bacteria in environmental microbiology and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium faecium
StrainPCAi_F2.5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium faecium PCAi_F2.5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium faecium PCAi_F2.5 genome assembly, contig:

Gene Summary

Adenine Count

2513267 bp

Thymine Count

2558177 bp

Guanine Count

1463941 bp

Cytosine Count

1508607 bp

Genome Length

8043992 bp

Protein-coding Genes

7196 genes

Non-Coding Genes

193 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted rhamnogalacturonide-specific trap-type transporter, substrate-binding component rhiaFM120_11850Not AvailableNegative2527550 - 252855737225.1
rhamnogalacturonides degradation protein rhinFM120_11855Not AvailableNegative2528578 - 252968442055.2
2-deoxy-d-gluconate 3-dehydrogenaseFM120_11860Not AvailableNegative2529914 - 253070228206.0
4-deoxy-l-threo-5-hexosulose-uronate ketol-isomeraseFM120_11865Not AvailableNegative2530724 - 253156332120.2
2-dehydro-3-deoxygluconate kinaseFM120_11870Not AvailableNegative2531576 - 253258336831.7
4-hydroxy-2-oxoglutarate aldolase @ 2-dehydro-3-deoxyphosphogluconate aldolaseFM120_11875Not AvailableNegative2532588 - 253323522708.7
regulatory proteins, iclrFM120_11880Not AvailableNegative2533396 - 253414828058.9
transcriptional regulator, merr familyFM120_11885Not AvailableNegative2534279 - 253474618141.7
permeases of the major facilitator superfamilyFM120_11890Not AvailablePositive2534847 - 253636454470.7
hypothetical proteinFM120_11895Not AvailablePositive2536364 - 253706826475.9

Displaying genes 2501 – 2510 of 7389 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.