Microbacterium sp. RU33B

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. RU33B is a rod-shaped bacterium characterized by a single replicon, indicating a streamlined genetic structure. The accession number for this strain is FTPO00000000.1, which serves as a reference for further studies and genetic analysis. As a member of the genus Microbacterium, this organism likely shares common features with other species in this group, including potential roles in soil and environmental microbiomes. Microbacterium species are often known for their capacity to degrade various organic compounds, which can contribute to nutrient cycling in ecosystems. The rod shape of Microbacterium sp. RU33B may also suggest adaptations for motility and interaction with its environment, although specific motility traits are not provided. This morphology is typical of many bacteria and can influence how these organisms colonize surfaces and form biofilms. Overall, the characteristics of Microbacterium sp. RU33B highlight its potential importance in ecological contexts, particularly in relation to biodegradation processes and interactions within microbial communities. The single replicon might suggest a level of genomic efficiency that could be advantageous for survival in diverse habitats. Understanding its specific ecological roles could provide insights into its contributions to environmental microbiology and biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. RU33B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. RU33B genome assembly, contig: Ga0136747_14,

Gene Summary

Adenine Count

508740 bp

Thymine Count

512564 bp

Guanine Count

1192629 bp

Cytosine Count

1192507 bp

Genome Length

3406440 bp

Protein-coding Genes

3173 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunitSAMN05880545_1566Not AvailableNegative1587263 - 158758911406.4
iron-regulated abc transporter permease protein sufdSAMN05880545_1567Not AvailableNegative1587586 - 158877641968.7
iron-regulated abc transporter membrane component sufbSAMN05880545_1568Not AvailableNegative1588779 - 159019752839.6
cytochrome c oxidase assembly protein subunit 15SAMN05880545_1569Not AvailablePositive1590434 - 159140534474.4
hypothetical proteinSAMN05880545_1570Not AvailablePositive1591518 - 159193414239.0
protein of unknown functionSAMN05880545_1571Not AvailableNegative1592072 - 159288429609.8
protoheme ix farnesyltransferaseSAMN05880545_1572Not AvailableNegative1593273 - 159421134405.7
transketolaseSAMN05880545_1573Not AvailablePositive1594461 - 159655474493.3
transaldolaseSAMN05880545_1574Not AvailablePositive1596551 - 159766939374.0
glucose-6-phosphate isomeraseSAMN05880545_1575Not AvailablePositive1597666 - 159928555985.4

Displaying genes 1551 – 1560 of 3223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.