Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714


Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine transport system permease protein/arginine/ornithine transport system permease proteinSAMN05421795_10936Not AvailableNegative3082977 - 308366624932.1
polar amino acid transport system substrate-binding protein/arginine/ornithine transport system substrate-binding proteinSAMN05421795_10937Not AvailableNegative3083721 - 308451528867.9
amino acid abc transporter atp-binding protein, paat familySAMN05421795_10938Not AvailableNegative3084543 - 308531328140.0
nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductaseSAMN05421795_10939Not AvailableNegative3085310 - 308668948152.3
2fe-2s iron-sulfur cluster binding domain-containing proteinSAMN05421795_10940Not AvailableNegative3086682 - 308700211202.7
glycine/d-amino acid oxidaseSAMN05421795_10941Not AvailableNegative3086968 - 308808939198.4
transcriptional regulator, lysr familySAMN05421795_10942Not AvailablePositive3088183 - 308909133092.0
dna-binding transcriptional regulator, merr familySAMN05421795_10943Not AvailableNegative3089159 - 308958716349.8
hypothetical proteinSAMN05421795_10944Not AvailablePositive3089761 - 309092440952.6
uncharacterized conserved proteinSAMN05421795_10945Not AvailablePositive3090957 - 309142716818.3

Displaying genes 2951 – 2960 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.