Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714


Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-(carboxyamino)imidazole ribonucleotide mutaseSAMN05421795_10764Not AvailablePositive2774996 - 277551117853.5
5-(carboxyamino)imidazole ribonucleotide synthaseSAMN05421795_10765Not AvailablePositive2775515 - 277658237454.9
Trna-proNot AvailableNot AvailablePositive2776677 - 2776753Not Available
hypothetical proteinSAMN05421795_10767Not AvailableNegative2776890 - 277744119408.6
cold-shock dna-binding protein familySAMN05421795_10768Not AvailableNegative2777462 - 277799519218.9
pyridoxamine 5'-phosphate oxidaseSAMN05421795_10769Not AvailableNegative2778108 - 277871322668.9
enoyl-[acyl-carrier-protein] reductaseSAMN05421795_10770Not AvailablePositive2778879 - 277970329713.5
xanthine phosphoribosyltransferaseSAMN05421795_10771Not AvailablePositive2779719 - 278022218914.6
hypothetical proteinSAMN05421795_10772Not AvailablePositive2780492 - 278112122495.8
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN05421795_10773Not AvailablePositive2781397 - 278270748496.4

Displaying genes 2661 – 2670 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.