Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714


Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter substrate-binding protein, phot familySAMN05421795_106123Not AvailablePositive2648637 - 264966536004.4
phosphate abc transporter membrane protein 1, phot familySAMN05421795_106124Not AvailablePositive2649806 - 265126650818.0
phosphate abc transporter membrane protein 2, phot familySAMN05421795_106125Not AvailablePositive2651263 - 265260947836.7
phosphate abc transporter atp-binding protein, phot familySAMN05421795_106126Not AvailablePositive2652623 - 265342029482.1
phosphate uptake regulator, phouSAMN05421795_106127Not AvailablePositive2653438 - 265415726635.0
two component transcriptional regulator, winged helix familySAMN05421795_106128Not AvailablePositive2654163 - 265485526058.5
ribokinaseSAMN05421795_106129Not AvailableNegative2654891 - 265577229613.4
malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+)SAMN05421795_106130Not AvailableNegative2655786 - 265805381177.2
dna mismatch repair protein mutsSAMN05421795_106131Not AvailablePositive2658204 - 266082594268.2
hypothetical proteinSAMN05421795_106132Not AvailableNegative2660794 - 266150423384.1

Displaying genes 2531 – 2540 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.