Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714


Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, gntr familySAMN05421795_10652Not AvailableNegative2578585 - 257926225103.1
4-hydroxy-tetrahydrodipicolinate synthaseSAMN05421795_10653Not AvailablePositive2579661 - 258029322359.5
4-hydroxy-tetrahydrodipicolinate synthaseSAMN05421795_10654Not AvailablePositive2580290 - 258057410113.4
d-lactate dehydrogenase (cytochrome)SAMN05421795_10655Not AvailablePositive2580562 - 258192948476.9
transcriptional regulator, laci familySAMN05421795_10656Not AvailableNegative2581898 - 258297137335.8
3-hydroxyisobutyrate dehydrogenase/2-hydroxy-3-oxopropionate reductaseSAMN05421795_10657Not AvailablePositive2583103 - 258399929351.2
putative nucleotide-binding of sugar-metabolising enzymeSAMN05421795_10658Not AvailablePositive2584366 - 258493819247.4
class ii aldolase and adducin n-terminal domain-containing proteinSAMN05421795_10659Not AvailablePositive2585146 - 258547211747.5
hydroxypyruvate isomeraseSAMN05421795_10660Not AvailablePositive2585472 - 258625727909.2
4-hydroxy-2-oxoheptanedioate aldolaseSAMN05421795_10661Not AvailablePositive2586254 - 258705427496.3

Displaying genes 2461 – 2470 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.