Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714 genome assembly, contig:

Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catalase-peroxidaseSAMN05421795_104224Not AvailableNegative2274954 - 227712879522.5
transcriptional regulator, lysr familySAMN05421795_104225Not AvailablePositive2277330 - 227825633095.8
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05421795_104226Not AvailablePositive2278489 - 2282982165837.0
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN05421795_104227Not AvailableNegative2283006 - 228498270223.0
methyl-accepting chemotaxis proteinSAMN05421795_104228Not AvailableNegative2285688 - 228798880599.5
dna-binding transcriptional regulator, csgd familySAMN05421795_104229Not AvailablePositive2288353 - 229013164159.3
phospholipid-binding protein, pbp familySAMN05421795_104230Not AvailablePositive2290714 - 229127719211.3
hypothetical proteinSAMN05421795_104231Not AvailablePositive2291951 - 229227711379.2
phosphonate transport system atp-binding proteinSAMN05421795_104232Not AvailablePositive2292440 - 229326129610.6
phosphonate transport system substrate-binding proteinSAMN05421795_104233Not AvailablePositive2293316 - 229421231693.6

Displaying genes 2181 – 2190 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.