Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714

FTOM00000000.1

Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tryptophan synthase, alpha chainSAMN05421795_102560Not AvailableNegative1512177 - 151296827456.1
hypothetical proteinSAMN05421795_102561Not AvailablePositive1513160 - 151425739165.8
hypothetical proteinSAMN05421795_102562Not AvailablePositive1515166 - 151580723985.3
phosphohistidine phosphataseSAMN05421795_102563Not AvailablePositive1515972 - 151649018983.6
tryptophan synthase beta chain/tryptophan synthase beta chainSAMN05421795_102564Not AvailablePositive1516518 - 151771743034.1
ferredoxinSAMN05421795_102565Not AvailableNegative1517828 - 151819613328.9
l-glutamine abc transporter atp-binding protein /l-glutamate abc transporter atp-binding protein /l-aspartate abc transporter atp-binding protein /l-asparagine abc transporter atp-binding proteinSAMN05421795_102566Not AvailableNegative1518576 - 151936729912.3
l-glutamine abc transporter membrane protein /l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein /l-asparagine abc transporter membrane proteinSAMN05421795_102567Not AvailableNegative1519378 - 152068248066.7
l-glutamine abc transporter membrane protein /l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein /l-asparagine abc transporter membrane proteinSAMN05421795_102568Not AvailableNegative1520684 - 152193745691.1
l-glutamine-binding protein /l-glutamate-binding protein /l-aspartate-binding protein /l-asparagine-binding proteinSAMN05421795_102569Not AvailableNegative1522075 - 152309135626.9

Displaying genes 1501 – 1510 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.